AJR23191.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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gene co-occurrence

gene fusions

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[Homology]

Score

AJR23191.1

acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)

Predicted Functional Partners:

AJR25663.1

0.910

AJR23192.1

0.800

AJR23193.1

0.616

AJR24110.1

0.412

AJR23291.1

0.400

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23191.1	AJR23192.1	TZ53_04825	TZ53_04830	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AJR23191.1	AJR23193.1	TZ53_04825	TZ53_04835	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
AJR23191.1	AJR23291.1	TZ53_04825	TZ53_05500	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.400
AJR23191.1	AJR24110.1	TZ53_04825	TZ53_10600	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AJR23191.1	AJR25663.1	TZ53_04825	TZ53_19890	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
AJR23192.1	AJR23191.1	TZ53_04830	TZ53_04825	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AJR23192.1	AJR23193.1	TZ53_04830	TZ53_04835	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
AJR23193.1	AJR23191.1	TZ53_04835	TZ53_04825	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.616
AJR23193.1	AJR23192.1	TZ53_04835	TZ53_04830	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
AJR23291.1	AJR23191.1	TZ53_05500	TZ53_04825	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
AJR23291.1	AJR24110.1	TZ53_05500	TZ53_10600	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
AJR23291.1	AJR25663.1	TZ53_05500	TZ53_19890	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
AJR24110.1	AJR23191.1	TZ53_10600	TZ53_04825	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AJR24110.1	AJR23291.1	TZ53_10600	TZ53_05500	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.414
AJR24110.1	AJR25663.1	TZ53_10600	TZ53_19890	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AJR25663.1	AJR23191.1	TZ53_19890	TZ53_04825	acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
AJR25663.1	AJR23291.1	TZ53_19890	TZ53_05500	acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.400
AJR25663.1	AJR24110.1	TZ53_19890	TZ53_10600	acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412