Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AJR23211.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)    
Predicted Functional Partners:
AJR23210.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 0.986
AJR23209.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
emrB
Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
 
 0.936
AJR24761.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.930
AJR22621.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.852
AJR25300.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.852
AJR23236.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.845
AJR23482.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.813
AJR26440.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.813
AJR23455.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.810
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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