AJR23211.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR23211.1

Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)

Predicted Functional Partners:

AJR23210.1

0.977

AJR23209.1

0.926

emrB

0.894

AJR22621.1

0.738

AJR23236.1

0.725

AJR24761.1

0.684

AJR26440.1

0.652

AJR23482.1

0.650

AJR26145.1

0.645

AJR25643.1

0.645

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22621.1	AJR23211.1	TZ53_01285	TZ53_04960	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
AJR22621.1	emrB	TZ53_01285	TZ53_01275	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.917
AJR23209.1	AJR23210.1	TZ53_04950	TZ53_04955	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.842
AJR23209.1	AJR23211.1	TZ53_04950	TZ53_04960	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
AJR23210.1	AJR23209.1	TZ53_04955	TZ53_04950	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
AJR23210.1	AJR23211.1	TZ53_04955	TZ53_04960	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AJR23211.1	AJR22621.1	TZ53_04960	TZ53_01285	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
AJR23211.1	AJR23209.1	TZ53_04960	TZ53_04950	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
AJR23211.1	AJR23210.1	TZ53_04960	TZ53_04955	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.977
AJR23211.1	AJR23236.1	TZ53_04960	TZ53_05125	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR23211.1	AJR23482.1	TZ53_04960	TZ53_06805	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
AJR23211.1	AJR24761.1	TZ53_04960	TZ53_14545	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684
AJR23211.1	AJR25643.1	TZ53_04960	TZ53_19790	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
AJR23211.1	AJR26145.1	TZ53_04960	TZ53_03465	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
AJR23211.1	AJR26440.1	TZ53_04960	TZ53_15850	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.652
AJR23211.1	emrB	TZ53_04960	TZ53_01275	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	0.894
AJR23236.1	AJR23211.1	TZ53_05125	TZ53_04960	Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR23482.1	AJR23211.1	TZ53_06805	TZ53_04960	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
AJR23482.1	AJR24761.1	TZ53_06805	TZ53_14545	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AJR23482.1	AJR25643.1	TZ53_06805	TZ53_19790	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905