STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23218.1Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
AJR26175.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.810
AJR23220.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
AJR23219.1
beta-D-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.613
AJR23831.1
Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.560
AJR23221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.533
AJR23242.1
Tricarballylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.448
AJR23225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.445
AJR23243.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.434
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.