AJR23254.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR23254.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)

Predicted Functional Partners:

AJR24124.1

0.541

AJR25143.1

0.541

AJR23255.1

0.457

AJR26061.1

0.444

AJR22499.1

0.444

AJR22933.1

0.444

AJR23765.1

0.444

AJR23950.1

0.444

AJR24685.1

0.444

AJR23838.1

0.428

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22499.1	AJR23254.1	TZ53_00545	TZ53_05250	FAD-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR22499.1	AJR24685.1	TZ53_00545	TZ53_14060	FAD-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
AJR22933.1	AJR23254.1	TZ53_03300	TZ53_05250	Ubiquinone biosynthesis protein UbiH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23254.1	AJR22499.1	TZ53_05250	TZ53_00545	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23254.1	AJR22933.1	TZ53_05250	TZ53_03300	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ubiquinone biosynthesis protein UbiH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23254.1	AJR23255.1	TZ53_05250	TZ53_05255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AJR23254.1	AJR23765.1	TZ53_05250	TZ53_08565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23254.1	AJR23838.1	TZ53_05250	TZ53_08985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AJR23254.1	AJR23950.1	TZ53_05250	TZ53_09660	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23254.1	AJR24124.1	TZ53_05250	TZ53_10675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJR23254.1	AJR24685.1	TZ53_05250	TZ53_14060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23254.1	AJR25143.1	TZ53_05250	TZ53_16825	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJR23254.1	AJR26061.1	TZ53_05250	TZ53_00490	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23255.1	AJR23254.1	TZ53_05255	TZ53_05250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AJR23765.1	AJR23254.1	TZ53_08565	TZ53_05250	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR23765.1	AJR24685.1	TZ53_08565	TZ53_14060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AJR23838.1	AJR23254.1	TZ53_08985	TZ53_05250	Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AJR23950.1	AJR23254.1	TZ53_09660	TZ53_05250	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR24124.1	AJR23254.1	TZ53_10675	TZ53_05250	Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJR24685.1	AJR22499.1	TZ53_14060	TZ53_00545	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	FAD-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404