AJR23298.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR23298.1

(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)

Predicted Functional Partners:

AJR23297.1

0.815

AJR25384.1

0.811

AJR26492.1

0.800

AJR26188.1

0.664

AJR23309.1

0.581

AJR23262.1

0.504

AJR25355.1

0.503

AJR25368.1

0.471

AJR25390.1

0.459

AJR25366.1

0.458

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23262.1	AJR23298.1	TZ53_05305	TZ53_05535	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.504
AJR23262.1	AJR25355.1	TZ53_05305	TZ53_18125	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.717
AJR23262.1	AJR25390.1	TZ53_05305	TZ53_18305	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
AJR23297.1	AJR23298.1	TZ53_05530	TZ53_05535	3-ketosteroid-delta-1-dehydrogenase; Initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJR23297.1	AJR25390.1	TZ53_05530	TZ53_18305	3-ketosteroid-delta-1-dehydrogenase; Initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJR23297.1	AJR26188.1	TZ53_05530	TZ53_05540	3-ketosteroid-delta-1-dehydrogenase; Initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
AJR23297.1	AJR26492.1	TZ53_05530	TZ53_18550	3-ketosteroid-delta-1-dehydrogenase; Initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bile-acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
AJR23298.1	AJR23262.1	TZ53_05535	TZ53_05305	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.504
AJR23298.1	AJR23297.1	TZ53_05535	TZ53_05530	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-ketosteroid-delta-1-dehydrogenase; Initiates steroid ring degradation; catalyzes the transhydrogenation of 3-keto-4-ene-steroid to 3-keto-1,4-diene-steroid e.g., progesterone to 1,4-androstadiene-3,17-dione; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJR23298.1	AJR23309.1	TZ53_05535	TZ53_05615	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
AJR23298.1	AJR25355.1	TZ53_05535	TZ53_18125	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
AJR23298.1	AJR25366.1	TZ53_05535	TZ53_18180	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.458
AJR23298.1	AJR25368.1	TZ53_05535	TZ53_18190	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
AJR23298.1	AJR25384.1	TZ53_05535	TZ53_18275	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
AJR23298.1	AJR25390.1	TZ53_05535	TZ53_18305	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
AJR23298.1	AJR26188.1	TZ53_05535	TZ53_05540	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
AJR23298.1	AJR26492.1	TZ53_05535	TZ53_18550	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bile-acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AJR23309.1	AJR23298.1	TZ53_05615	TZ53_05535	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
AJR23309.1	AJR25355.1	TZ53_05615	TZ53_18125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AJR23309.1	AJR25390.1	TZ53_05615	TZ53_18305	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.562