AJR23300.1 protein (Sphingobium sp. YBL2) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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co-expression

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[Homology]

Score

AJR23300.1

phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)

Predicted Functional Partners:

AJR23301.1

0.757

AJR26190.1

0.546

AJR23299.1

0.536

AJR26189.1

0.501

AJR24134.1

0.425

dld

0.418

AJR24704.1

0.418

AJR25025.1

0.418

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23299.1	AJR23300.1	TZ53_05550	TZ53_05560	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
AJR23299.1	AJR23301.1	TZ53_05550	TZ53_05565	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.501
AJR23299.1	AJR26189.1	TZ53_05550	TZ53_05545	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
AJR23299.1	AJR26190.1	TZ53_05550	TZ53_05555	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
AJR23300.1	AJR23299.1	TZ53_05560	TZ53_05550	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
AJR23300.1	AJR23301.1	TZ53_05560	TZ53_05565	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.757
AJR23300.1	AJR24134.1	TZ53_05560	TZ53_10740	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
AJR23300.1	AJR24704.1	TZ53_05560	TZ53_14190	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJR23300.1	AJR25025.1	TZ53_05560	TZ53_16150	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJR23300.1	AJR26189.1	TZ53_05560	TZ53_05545	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AJR23300.1	AJR26190.1	TZ53_05560	TZ53_05555	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.546
AJR23300.1	dld	TZ53_05560	TZ53_00515	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.	0.418
AJR23301.1	AJR23299.1	TZ53_05565	TZ53_05550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AJR23301.1	AJR23300.1	TZ53_05565	TZ53_05560	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
AJR23301.1	AJR26189.1	TZ53_05565	TZ53_05545	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.424
AJR23301.1	AJR26190.1	TZ53_05565	TZ53_05555	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	NADPH nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AJR24134.1	AJR23300.1	TZ53_10740	TZ53_05560	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.425
AJR24134.1	AJR24704.1	TZ53_10740	TZ53_14190	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
AJR24134.1	AJR25025.1	TZ53_10740	TZ53_16150	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
AJR24134.1	AJR26189.1	TZ53_10740	TZ53_05545	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.469