AJR23398.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

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[Homology]

Score

AJR23398.1

Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)

Predicted Functional Partners:

AJR23397.1

0.829

pcm

0.767

AJR23399.1

0.714

AJR23400.1

0.714

AJR23401.1

0.714

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23397.1	AJR23398.1	TZ53_06255	TZ53_06260	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJR23397.1	AJR23399.1	TZ53_06255	TZ53_06265	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.704
AJR23397.1	AJR23400.1	TZ53_06255	TZ53_06270	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AJR23397.1	AJR23401.1	TZ53_06255	TZ53_06275	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AJR23397.1	pcm	TZ53_06255	TZ53_06280	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.	0.778
AJR23398.1	AJR23397.1	TZ53_06260	TZ53_06255	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJR23398.1	AJR23399.1	TZ53_06260	TZ53_06265	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.714
AJR23398.1	AJR23400.1	TZ53_06260	TZ53_06270	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR23398.1	AJR23401.1	TZ53_06260	TZ53_06275	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR23398.1	pcm	TZ53_06260	TZ53_06280	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.	0.767
AJR23399.1	AJR23397.1	TZ53_06265	TZ53_06255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AJR23399.1	AJR23398.1	TZ53_06265	TZ53_06260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR23399.1	AJR23400.1	TZ53_06265	TZ53_06270	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJR23399.1	AJR23401.1	TZ53_06265	TZ53_06275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJR23399.1	pcm	TZ53_06265	TZ53_06280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.	0.773
AJR23400.1	AJR23397.1	TZ53_06270	TZ53_06255	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.704
AJR23400.1	AJR23398.1	TZ53_06270	TZ53_06260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR23400.1	AJR23399.1	TZ53_06270	TZ53_06265	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AJR23400.1	AJR23401.1	TZ53_06270	TZ53_06275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJR23400.1	pcm	TZ53_06270	TZ53_06280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.	0.782