AJR23412.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

AJR23412.1

LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)

Predicted Functional Partners:

AJR24699.1

0.919

AJR24768.1

0.900

AJR23411.1

0.581

AJR23807.1

0.574

AJR25056.1

0.553

AJR26350.1

0.551

AJR25039.1

0.549

AJR23899.1

0.529

AJR26332.1

0.529

AJR24686.1

0.529

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23411.1	AJR23412.1	TZ53_06355	TZ53_06360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
AJR23412.1	AJR23411.1	TZ53_06360	TZ53_06355	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
AJR23412.1	AJR23807.1	TZ53_06360	TZ53_08810	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
AJR23412.1	AJR23899.1	TZ53_06360	TZ53_09350	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
AJR23412.1	AJR24686.1	TZ53_06360	TZ53_14065	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
AJR23412.1	AJR24699.1	TZ53_06360	TZ53_14155	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AJR23412.1	AJR24768.1	TZ53_06360	TZ53_14585	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR23412.1	AJR25039.1	TZ53_06360	TZ53_16220	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.549
AJR23412.1	AJR25056.1	TZ53_06360	TZ53_16305	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
AJR23412.1	AJR26332.1	TZ53_06360	TZ53_11245	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
AJR23412.1	AJR26350.1	TZ53_06360	TZ53_11930	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.551
AJR23807.1	AJR23412.1	TZ53_08810	TZ53_06360	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
AJR23807.1	AJR23899.1	TZ53_08810	TZ53_09350	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AJR23807.1	AJR24686.1	TZ53_08810	TZ53_14065	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AJR23807.1	AJR24699.1	TZ53_08810	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23807.1	AJR24768.1	TZ53_08810	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23807.1	AJR26332.1	TZ53_08810	TZ53_11245	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
AJR23807.1	AJR26350.1	TZ53_08810	TZ53_11930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
AJR23899.1	AJR23412.1	TZ53_09350	TZ53_06360	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
AJR23899.1	AJR23807.1	TZ53_09350	TZ53_08810	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985