Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJR23430.1Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1237 aa)    
Predicted Functional Partners:
AJR26267.1
Peptidase S33; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.793
AJR23711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.781
AJR23449.1
Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.755
AJR26075.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.707
AJR25573.1
Cadherin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.687
AJR23000.1
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.631
AJR26448.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.631
AJR24948.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.571
AJR26453.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.515
AJR25854.1
Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.515
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.