AJR23534.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR23534.1

Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)

Predicted Functional Partners:

AJR23535.1

0.905

AJR23054.1

0.779

AJR23533.1

0.695

AJR23605.1

0.460

AJR23532.1

0.402

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23054.1	AJR23533.1	TZ53_04020	TZ53_07140	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.456
AJR23054.1	AJR23534.1	TZ53_04020	TZ53_07145	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
AJR23054.1	AJR23605.1	TZ53_04020	TZ53_07635	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
AJR23532.1	AJR23533.1	TZ53_07135	TZ53_07140	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.568
AJR23532.1	AJR23534.1	TZ53_07135	TZ53_07145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
AJR23533.1	AJR23054.1	TZ53_07140	TZ53_04020	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
AJR23533.1	AJR23532.1	TZ53_07140	TZ53_07135	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
AJR23533.1	AJR23534.1	TZ53_07140	TZ53_07145	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.695
AJR23533.1	AJR23535.1	TZ53_07140	TZ53_07150	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
AJR23534.1	AJR23054.1	TZ53_07145	TZ53_04020	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
AJR23534.1	AJR23532.1	TZ53_07145	TZ53_07135	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
AJR23534.1	AJR23533.1	TZ53_07145	TZ53_07140	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.695
AJR23534.1	AJR23535.1	TZ53_07145	TZ53_07150	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AJR23534.1	AJR23605.1	TZ53_07145	TZ53_07635	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
AJR23535.1	AJR23533.1	TZ53_07150	TZ53_07140	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.699
AJR23535.1	AJR23534.1	TZ53_07150	TZ53_07145	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AJR23535.1	AJR23605.1	TZ53_07150	TZ53_07635	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503
AJR23605.1	AJR23054.1	TZ53_07635	TZ53_04020	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
AJR23605.1	AJR23534.1	TZ53_07635	TZ53_07145	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
AJR23605.1	AJR23535.1	TZ53_07635	TZ53_07150	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503