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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23550.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (273 aa)    
Predicted Functional Partners:
AJR23551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
AJR23552.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.805
AJR25945.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.632
AJR25946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.632
AJR25947.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.629
AJR25952.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.585
AJR25948.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.556
AJR22879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.532
AJR24849.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
  
 0.526
AJR25950.1
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.511
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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