AJR23607.1 protein (Sphingobium sp. YBL2) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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[Homology]

Score

AJR23607.1

Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (641 aa)

Predicted Functional Partners:

AJR23605.1

0.869

AJR23608.1

0.731

parC

0.651

gyrA

0.651

AJR23606.1

0.629

AJR25404.1

0.447

AJR26157.1

0.417

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23605.1	AJR23606.1	TZ53_07635	TZ53_07640	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR23605.1	AJR23607.1	TZ53_07635	TZ53_07650	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AJR23605.1	AJR26157.1	TZ53_07635	TZ53_04025	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
AJR23606.1	AJR23605.1	TZ53_07640	TZ53_07635	Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR23606.1	AJR23607.1	TZ53_07640	TZ53_07650	Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AJR23606.1	AJR23608.1	TZ53_07640	TZ53_07655	Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
AJR23607.1	AJR23605.1	TZ53_07650	TZ53_07635	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AJR23607.1	AJR23606.1	TZ53_07650	TZ53_07640	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AJR23607.1	AJR23608.1	TZ53_07650	TZ53_07655	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR23607.1	AJR25404.1	TZ53_07650	TZ53_18375	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metapyrocatechase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AJR23607.1	AJR26157.1	TZ53_07650	TZ53_04025	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
AJR23607.1	gyrA	TZ53_07650	TZ53_17455	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.651
AJR23607.1	parC	TZ53_07650	TZ53_16465	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.	0.651
AJR23608.1	AJR23606.1	TZ53_07655	TZ53_07640	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.471
AJR23608.1	AJR23607.1	TZ53_07655	TZ53_07650	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR25404.1	AJR23607.1	TZ53_18375	TZ53_07650	Metapyrocatechase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.447
AJR26157.1	AJR23605.1	TZ53_04025	TZ53_07635	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chloroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
AJR26157.1	AJR23607.1	TZ53_04025	TZ53_07650	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
gyrA	AJR23607.1	TZ53_17455	TZ53_07650	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
gyrA	parC	TZ53_17455	TZ53_16465	DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.	0.889