AJR23623.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR23623.1

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)

Predicted Functional Partners:

AJR23621.1

0.827

AJR23622.1

0.819

AJR24699.1

0.731

AJR24768.1

0.681

AJR23620.1

0.677

AJR25486.1

0.677

AJR26029.1

0.644

AJR22547.1

0.621

AJR26350.1

0.614

AJR25702.1

0.560

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22547.1	AJR23620.1	TZ53_00840	TZ53_07720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR23623.1	TZ53_00840	TZ53_07735	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
AJR22547.1	AJR24699.1	TZ53_00840	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR24768.1	TZ53_00840	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR25486.1	TZ53_00840	TZ53_18855	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
AJR22547.1	AJR25702.1	TZ53_00840	TZ53_20110	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR26029.1	TZ53_00840	TZ53_22075	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
AJR22547.1	AJR26350.1	TZ53_00840	TZ53_11930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AJR23620.1	AJR22547.1	TZ53_07720	TZ53_00840	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23620.1	AJR23621.1	TZ53_07720	TZ53_07725	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.484
AJR23620.1	AJR23622.1	TZ53_07720	TZ53_07730	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.480
AJR23620.1	AJR23623.1	TZ53_07720	TZ53_07735	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
AJR23620.1	AJR24699.1	TZ53_07720	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23620.1	AJR24768.1	TZ53_07720	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23620.1	AJR25486.1	TZ53_07720	TZ53_18855	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AJR23620.1	AJR25702.1	TZ53_07720	TZ53_20110	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJR23620.1	AJR26029.1	TZ53_07720	TZ53_22075	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AJR23620.1	AJR26350.1	TZ53_07720	TZ53_11930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AJR23621.1	AJR23620.1	TZ53_07725	TZ53_07720	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.484
AJR23621.1	AJR23622.1	TZ53_07725	TZ53_07730	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.951