STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23644.1Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
AJR23645.1
Dihydroxy-acid dehydratase; Catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.
 
   
 0.822
AJR23643.1
Aldose epimerase; Converts alpha-aldose to the beta-anomer.
 
  
 0.782
AJR23642.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.706
AJR23641.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
AJR26237.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.607
AJR26258.1
2-oxo-3-deoxygalactonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.549
AJR26331.1
2-dehydro-3-deoxygalactonokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.524
AJR23598.1
Quinoprotein glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.523
AJR26359.1
Quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.523
AJR23646.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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