STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23677.1Nitrogen fixation protein FixL; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)    
Predicted Functional Partners:
fixJ
Response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
fixJ-2
Response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.984
AJR22547.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.981
AJR23899.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
AJR24699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.980
AJR24768.1
Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.980
AJR25702.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.977
AJR26332.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.975
AJR24686.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.975
AJR24687.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.975
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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