AJR23743.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AJR23743.1

Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)

Predicted Functional Partners:

AJR23742.1

0.977

AJR23741.1

0.911

AJR23740.1

0.865

AJR23709.1

0.820

AJR26291.1

0.807

AJR23597.1

0.802

AJR23755.1

0.782

AJR23754.1

0.779

AJR23631.1

0.777

AJR23753.1

0.777

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23597.1	AJR23743.1	TZ53_07595	TZ53_08440	Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
AJR23597.1	AJR23753.1	TZ53_07595	TZ53_08490	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AJR23631.1	AJR23743.1	TZ53_07790	TZ53_08440	Cytochrome Cbb3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
AJR23709.1	AJR23743.1	TZ53_08245	TZ53_08440	Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
AJR23740.1	AJR23741.1	TZ53_08425	TZ53_08430	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
AJR23740.1	AJR23742.1	TZ53_08425	TZ53_08435	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
AJR23740.1	AJR23743.1	TZ53_08425	TZ53_08440	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
AJR23740.1	AJR23753.1	TZ53_08425	TZ53_08490	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AJR23740.1	AJR23754.1	TZ53_08425	TZ53_08495	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
AJR23741.1	AJR23740.1	TZ53_08430	TZ53_08425	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.894
AJR23741.1	AJR23742.1	TZ53_08430	TZ53_08435	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR23741.1	AJR23743.1	TZ53_08430	TZ53_08440	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AJR23741.1	AJR23753.1	TZ53_08430	TZ53_08490	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR23741.1	AJR23754.1	TZ53_08430	TZ53_08495	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.758
AJR23742.1	AJR23740.1	TZ53_08435	TZ53_08425	Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
AJR23742.1	AJR23741.1	TZ53_08435	TZ53_08430	Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR23742.1	AJR23743.1	TZ53_08435	TZ53_08440	Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AJR23742.1	AJR23753.1	TZ53_08435	TZ53_08490	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
AJR23742.1	AJR23754.1	TZ53_08435	TZ53_08495	Derived by automated computational analysis using gene prediction method: Protein Homology.	Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
AJR23743.1	AJR23597.1	TZ53_08440	TZ53_07595	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802