STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23774.1Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)    
Predicted Functional Partners:
AJR23775.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.790
AJR23776.1
Autoinducer synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AJR23207.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
AJR26272.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.525
AJR23777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
AJR25080.1
Alpha,alpha-trehalose-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.405
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.