AJR23784.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR23784.1

Derived by automated computational analysis using gene prediction method: Protein Homology. (678 aa)

Predicted Functional Partners:

rplQ

0.596

AJR23785.1

0.550

htpG

0.499

AJR24154.1

0.434

lon

0.424

def

0.417

pepN

0.408

AJR22646.1

0.405

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22646.1	AJR23784.1	TZ53_01435	TZ53_08675	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
AJR22646.1	htpG	TZ53_01435	TZ53_00145	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heat shock protein 90; Molecular chaperone. Has ATPase activity.	0.792
AJR22646.1	lon	TZ53_01435	TZ53_17255	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.	0.560
AJR23784.1	AJR22646.1	TZ53_08675	TZ53_01435	Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
AJR23784.1	AJR23785.1	TZ53_08675	TZ53_08680	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AJR23784.1	AJR24154.1	TZ53_08675	TZ53_10850	Derived by automated computational analysis using gene prediction method: Protein Homology.	Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
AJR23784.1	def	TZ53_08675	TZ53_14755	Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.417
AJR23784.1	htpG	TZ53_08675	TZ53_00145	Derived by automated computational analysis using gene prediction method: Protein Homology.	Heat shock protein 90; Molecular chaperone. Has ATPase activity.	0.499
AJR23784.1	lon	TZ53_08675	TZ53_17255	Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.	0.424
AJR23784.1	pepN	TZ53_08675	TZ53_04750	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AJR23784.1	rplQ	TZ53_08675	TZ53_10855	Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.596
AJR23785.1	AJR23784.1	TZ53_08680	TZ53_08675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AJR24154.1	AJR23784.1	TZ53_10850	TZ53_08675	Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.434
AJR24154.1	rplQ	TZ53_10850	TZ53_10855	Prolyl endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
def	AJR23784.1	TZ53_14755	TZ53_08675	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.417
def	rplQ	TZ53_14755	TZ53_10855	Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.890
htpG	AJR22646.1	TZ53_00145	TZ53_01435	Heat shock protein 90; Molecular chaperone. Has ATPase activity.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
htpG	AJR23784.1	TZ53_00145	TZ53_08675	Heat shock protein 90; Molecular chaperone. Has ATPase activity.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
htpG	lon	TZ53_00145	TZ53_17255	Heat shock protein 90; Molecular chaperone. Has ATPase activity.	DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.	0.782
lon	AJR22646.1	TZ53_17255	TZ53_01435	DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560