AJR23866.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

AJR23866.1

4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)

Predicted Functional Partners:

AJR23867.1

0.958

AJR23868.1

0.906

mdh

0.761

AJR23870.1

0.685

AJR25106.1

0.597

AJR23825.1

0.594

AJR22422.1

0.585

AJR25013.1

0.572

cysN

0.560

AJR22884.1

0.557

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22422.1	AJR23825.1	TZ53_00090	TZ53_08915	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
AJR22422.1	AJR23866.1	TZ53_00090	TZ53_09145	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
AJR22422.1	AJR23867.1	TZ53_00090	TZ53_09150	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AJR22422.1	AJR25013.1	TZ53_00090	TZ53_16040	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
AJR22884.1	AJR23866.1	TZ53_02995	TZ53_09145	Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
AJR22884.1	AJR23867.1	TZ53_02995	TZ53_09150	Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.	Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
AJR22884.1	mdh	TZ53_02995	TZ53_14850	Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.	Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.	0.998
AJR23825.1	AJR22422.1	TZ53_08915	TZ53_00090	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.520
AJR23825.1	AJR23866.1	TZ53_08915	TZ53_09145	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
AJR23825.1	AJR23867.1	TZ53_08915	TZ53_09150	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
AJR23825.1	AJR23868.1	TZ53_08915	TZ53_09155	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
AJR23825.1	AJR23870.1	TZ53_08915	TZ53_09175	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
AJR23825.1	AJR25013.1	TZ53_08915	TZ53_16040	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
AJR23825.1	AJR25106.1	TZ53_08915	TZ53_16595	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
AJR23866.1	AJR22422.1	TZ53_09145	TZ53_00090	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
AJR23866.1	AJR22884.1	TZ53_09145	TZ53_02995	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.	0.557
AJR23866.1	AJR23825.1	TZ53_09145	TZ53_08915	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
AJR23866.1	AJR23867.1	TZ53_09145	TZ53_09150	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AJR23866.1	AJR23868.1	TZ53_09145	TZ53_09155	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
AJR23866.1	AJR23870.1	TZ53_09145	TZ53_09175	4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.685