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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23927.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
AJR24924.1
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.982
AJR25074.1
Polysaccharide export outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.976
AJR23017.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.972
AJR23925.1
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
AJR25075.1
Protein tyrosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
AJR26149.1
Succinoglycan biosynthesis protein exop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.960
AJR25601.1
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.918
AJR22764.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.917
AJR25599.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.909
AJR25760.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.869
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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