STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR23929.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)    
Predicted Functional Partners:
AJR23928.1
Gellan polysaccharide biosynthesis protein GelF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
AJR26294.1
Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.562
AJR23927.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
AJR23926.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
AJR26293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
AJR23925.1
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
AJR23922.1
Succinoglycan biosynthesis ketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.422
AJR23923.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.422
AJR23924.1
Polysaccharide biosynthesis protein GumH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.
       0.422
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.