Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AJR26299.1Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
AJR23958.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family.
 
     0.638
AJR23946.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.623
AJR23953.1
9-O-acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.612
AJR23952.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
AJR26298.1
SapC-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
AJR25608.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.553
AJR24439.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.545
AJR23968.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
AJR23955.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.502
AJR23966.1
Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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