Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AJR23953.19-O-acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (653 aa)    
Predicted Functional Partners:
AJR23946.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.775
AJR23521.1
Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.
 
    0.757
AJR23955.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.690
AJR23949.1
alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.686
AJR26300.1
Xylan 1,4-beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.636
AJR26299.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.612
AJR23950.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.560
AJR23517.1
Hexuronate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.559
AJR23952.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.536
AJR26298.1
SapC-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.535
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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