STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJR24007.1Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
AJR24006.1
Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
AJR24009.1
Cobalamin biosynthesis protein CobS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
AJR25775.1
NADH-quinone oxidoreductase chain 13; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.779
AJR24008.1
OsmC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AJR24714.1
SulP family inorganic anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.761
nuoB
NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.599
AJR24010.1
Molecular chaperone Hsp70; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.591
AJR25959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.545
AJR26564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.537
AJR24005.1
Nucleoside diphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.