STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR24014.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
AJR24016.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.829
ftsE
Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.701
AJR24017.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
AJR25029.1
Exoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
AJR24018.1
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.688
AJR22555.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
AJR22572.1
MraZ protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.
  
     0.586
AJR25135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
AJR26074.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
AJR24360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.