AJR24016.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

AJR24016.1

Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)

Predicted Functional Partners:

ftsE

0.999

AJR26074.1

0.957

AJR24017.1

0.927

AJR24141.1

0.920

ftsQ

0.861

AJR24018.1

0.837

AJR24014.1

0.827

ftsA

0.808

AJR25137.1

0.793

AJR22564.1

0.792

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22564.1	AJR24016.1	TZ53_00930	TZ53_10090	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
AJR22564.1	AJR25137.1	TZ53_00930	TZ53_16795	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929
AJR22564.1	AJR26074.1	TZ53_00930	TZ53_01030	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.689
AJR22564.1	ftsA	TZ53_00930	TZ53_00895	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.	0.985
AJR22564.1	ftsE	TZ53_00930	TZ53_10085	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.815
AJR22564.1	ftsQ	TZ53_00930	TZ53_00900	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.	0.997
AJR24014.1	AJR24016.1	TZ53_10080	TZ53_10090	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
AJR24014.1	AJR24017.1	TZ53_10080	TZ53_10095	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.699
AJR24014.1	AJR24018.1	TZ53_10080	TZ53_10100	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
AJR24014.1	AJR26074.1	TZ53_10080	TZ53_01030	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
AJR24014.1	ftsE	TZ53_10080	TZ53_10085	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.699
AJR24016.1	AJR22564.1	TZ53_10090	TZ53_00930	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	0.792
AJR24016.1	AJR24014.1	TZ53_10090	TZ53_10080	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
AJR24016.1	AJR24017.1	TZ53_10090	TZ53_10095	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AJR24016.1	AJR24018.1	TZ53_10090	TZ53_10100	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
AJR24016.1	AJR24141.1	TZ53_10090	TZ53_10785	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
AJR24016.1	AJR25137.1	TZ53_10090	TZ53_16795	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
AJR24016.1	AJR26074.1	TZ53_10090	TZ53_01030	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957
AJR24016.1	ftsA	TZ53_10090	TZ53_00895	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.	0.808
AJR24016.1	ftsE	TZ53_10090	TZ53_10085	Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.	0.999