STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR24036.1Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
AJR26525.1
Vanillate O-demethylase oxidoreductase VanB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.640
AJR22468.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.636
AJR26311.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
AJR24035.1
Histidinol phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.543
AJR24705.1
DGPFAETKE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.496
AJR22467.1
3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.475
cobB
NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
  
    0.466
AJR24370.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.445
AJR24471.1
Carbon starvation protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.433
AJR23382.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.427
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.