AJR26344.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR26344.1

CelD-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)

Predicted Functional Partners:

AJR24282.1

0.965

AJR23997.1

0.662

AJR26345.1

0.661

AJR24922.1

0.658

AJR26412.1

0.643

AJR24360.1

0.625

AJR22555.1

0.598

AJR24799.1

0.589

AJR22994.1

0.556

AJR24350.1

0.548

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22555.1	AJR22994.1	TZ53_00885	TZ53_03630	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
AJR22555.1	AJR24282.1	TZ53_00885	TZ53_11645	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
AJR22555.1	AJR24350.1	TZ53_00885	TZ53_12025	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR22555.1	AJR24360.1	TZ53_00885	TZ53_12085	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
AJR22555.1	AJR24799.1	TZ53_00885	TZ53_14780	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
AJR22555.1	AJR24922.1	TZ53_00885	TZ53_15525	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CelD-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
AJR22555.1	AJR26344.1	TZ53_00885	TZ53_11650	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CelD-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
AJR22555.1	AJR26412.1	TZ53_00885	TZ53_14795	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
AJR22994.1	AJR22555.1	TZ53_03630	TZ53_00885	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
AJR22994.1	AJR23997.1	TZ53_03630	TZ53_09990	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AJR22994.1	AJR24282.1	TZ53_03630	TZ53_11645	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
AJR22994.1	AJR24350.1	TZ53_03630	TZ53_12025	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.710
AJR22994.1	AJR24360.1	TZ53_03630	TZ53_12085	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR22994.1	AJR24799.1	TZ53_03630	TZ53_14780	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
AJR22994.1	AJR24922.1	TZ53_03630	TZ53_15525	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CelD-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.723
AJR22994.1	AJR26344.1	TZ53_03630	TZ53_11650	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CelD-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
AJR22994.1	AJR26412.1	TZ53_03630	TZ53_14795	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.554
AJR23997.1	AJR22994.1	TZ53_09990	TZ53_03630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AJR23997.1	AJR24282.1	TZ53_09990	TZ53_11645	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.426
AJR23997.1	AJR24350.1	TZ53_09990	TZ53_12025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709