STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR24313.1Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)    
Predicted Functional Partners:
AJR24314.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.981
AJR22762.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.964
AJR22761.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
AJR22763.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.953
AJR24312.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.924
AJR22764.1
Capsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.888
AJR24315.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
AJR24286.1
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily.
 
   
 0.734
AJR23170.1
phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.676
AJR22923.1
Integral membrane protein Cj1412c; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.631
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.