AJR26369.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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textmining

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co-expression

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[Homology]

Score

AJR26369.1

Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (845 aa)

Predicted Functional Partners:

AJR22569.1

0.979

AJR25594.1

0.957

AJR25714.1

0.948

AJR23166.1

0.947

AJR25473.1

0.940

mtgA

0.938

AJR24481.1

0.819

AJR24217.1

0.678

AJR22448.1

0.677

AJR24336.1

0.674

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22448.1	AJR23166.1	TZ53_00225	TZ53_04685	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
AJR22448.1	AJR24336.1	TZ53_00225	TZ53_11955	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.687
AJR22448.1	AJR25714.1	TZ53_00225	TZ53_20180	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.641
AJR22448.1	AJR26369.1	TZ53_00225	TZ53_12855	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.677
AJR22448.1	mtgA	TZ53_00225	TZ53_19710	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.	0.503
AJR22569.1	AJR23166.1	TZ53_00955	TZ53_04685	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AJR22569.1	AJR24217.1	TZ53_00955	TZ53_11270	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.430
AJR22569.1	AJR25473.1	TZ53_00955	TZ53_18785	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S11; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.	0.955
AJR22569.1	AJR25594.1	TZ53_00955	TZ53_19490	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.935
AJR22569.1	AJR25714.1	TZ53_00955	TZ53_20180	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AJR22569.1	AJR26369.1	TZ53_00955	TZ53_12855	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AJR22569.1	mtgA	TZ53_00955	TZ53_19710	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.	0.960
AJR23166.1	AJR22448.1	TZ53_04685	TZ53_00225	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.651
AJR23166.1	AJR22569.1	TZ53_04685	TZ53_00955	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AJR23166.1	AJR24217.1	TZ53_04685	TZ53_11270	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.645
AJR23166.1	AJR24336.1	TZ53_04685	TZ53_11955	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.	0.572
AJR23166.1	AJR25473.1	TZ53_04685	TZ53_18785	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase S11; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.	0.918
AJR23166.1	AJR25594.1	TZ53_04685	TZ53_19490	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AJR23166.1	AJR25714.1	TZ53_04685	TZ53_20180	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
AJR23166.1	AJR26369.1	TZ53_04685	TZ53_12855	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947