AJR24644.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR24644.1

General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)

Predicted Functional Partners:

AJR25748.1

0.887

AJR23396.1

0.731

AJR23615.1

0.683

AJR24472.1

0.683

AJR25649.1

0.683

AJR24645.1

0.504

AJR24778.1

0.503

AJR25068.1

0.503

AJR22761.1

0.489

AJR24004.1

0.476

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22761.1	AJR24644.1	TZ53_02205	TZ53_13810	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.489
AJR22761.1	AJR25748.1	TZ53_02205	TZ53_20365	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
AJR23396.1	AJR24644.1	TZ53_06250	TZ53_13810	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR23396.1	AJR25748.1	TZ53_06250	TZ53_20365	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.745
AJR23615.1	AJR24004.1	TZ53_07690	TZ53_10025	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	0.446
AJR23615.1	AJR24472.1	TZ53_07690	TZ53_12790	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
AJR23615.1	AJR24644.1	TZ53_07690	TZ53_13810	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
AJR24004.1	AJR23615.1	TZ53_10025	TZ53_07690	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.446
AJR24004.1	AJR24472.1	TZ53_10025	TZ53_12790	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.463
AJR24004.1	AJR24644.1	TZ53_10025	TZ53_13810	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
AJR24004.1	AJR24778.1	TZ53_10025	TZ53_14635	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AJR24004.1	AJR25068.1	TZ53_10025	TZ53_16385	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	Organic hydroperoxide resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
AJR24472.1	AJR23615.1	TZ53_12790	TZ53_07690	Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
AJR24472.1	AJR24004.1	TZ53_12790	TZ53_10025	Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	0.463
AJR24472.1	AJR24644.1	TZ53_12790	TZ53_13810	Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
AJR24644.1	AJR22761.1	TZ53_13810	TZ53_02205	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.489
AJR24644.1	AJR23396.1	TZ53_13810	TZ53_06250	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR24644.1	AJR23615.1	TZ53_13810	TZ53_07690	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
AJR24644.1	AJR24004.1	TZ53_13810	TZ53_10025	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.	0.476
AJR24644.1	AJR24472.1	TZ53_13810	TZ53_12790	General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683