AJR24683.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR24683.1

Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)

Predicted Functional Partners:

AJR24684.1

0.885

AJR24685.1

0.773

AJR24686.1

0.590

AJR23681.1

0.474

AJR24687.1

0.445

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23681.1	AJR24683.1	TZ53_08095	TZ53_14050	Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AJR23681.1	AJR24685.1	TZ53_08095	TZ53_14060	Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR24683.1	AJR23681.1	TZ53_14050	TZ53_08095	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AJR24683.1	AJR24684.1	TZ53_14050	TZ53_14055	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
AJR24683.1	AJR24685.1	TZ53_14050	TZ53_14060	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJR24683.1	AJR24686.1	TZ53_14050	TZ53_14065	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
AJR24683.1	AJR24687.1	TZ53_14050	TZ53_14070	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AJR24684.1	AJR24683.1	TZ53_14055	TZ53_14050	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
AJR24684.1	AJR24685.1	TZ53_14055	TZ53_14060	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
AJR24684.1	AJR24686.1	TZ53_14055	TZ53_14065	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
AJR24685.1	AJR23681.1	TZ53_14060	TZ53_08095	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
AJR24685.1	AJR24683.1	TZ53_14060	TZ53_14050	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AJR24685.1	AJR24684.1	TZ53_14060	TZ53_14055	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.819
AJR24685.1	AJR24686.1	TZ53_14060	TZ53_14065	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AJR24685.1	AJR24687.1	TZ53_14060	TZ53_14070	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.414
AJR24686.1	AJR24683.1	TZ53_14065	TZ53_14050	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
AJR24686.1	AJR24684.1	TZ53_14065	TZ53_14055	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
AJR24686.1	AJR24685.1	TZ53_14065	TZ53_14060	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
AJR24686.1	AJR24687.1	TZ53_14065	TZ53_14070	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR24687.1	AJR24683.1	TZ53_14070	TZ53_14050	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445