AJR24730.1 protein (Sphingobium sp. YBL2) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR24730.1

Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)

Predicted Functional Partners:

AJR24131.1

0.789

AJR24699.1

0.731

AJR25486.1

0.704

AJR24768.1

0.681

AJR26029.1

0.644

AJR22547.1

0.592

AJR26350.1

0.578

AJR24733.1

0.556

AJR22802.1

0.548

flhA

0.545

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22547.1	AJR22802.1	TZ53_00840	TZ53_02470	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJR22547.1	AJR24131.1	TZ53_00840	TZ53_10720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.534
AJR22547.1	AJR24699.1	TZ53_00840	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR24730.1	TZ53_00840	TZ53_14335	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
AJR22547.1	AJR24768.1	TZ53_00840	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR25486.1	TZ53_00840	TZ53_18855	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
AJR22547.1	AJR26029.1	TZ53_00840	TZ53_22075	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
AJR22547.1	AJR26350.1	TZ53_00840	TZ53_11930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AJR22547.1	flhA	TZ53_00840	TZ53_02540	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.	0.511
AJR22802.1	AJR22547.1	TZ53_02470	TZ53_00840	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.541
AJR22802.1	AJR24699.1	TZ53_02470	TZ53_14155	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AJR22802.1	AJR24730.1	TZ53_02470	TZ53_14335	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
AJR22802.1	AJR24768.1	TZ53_02470	TZ53_14585	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
AJR22802.1	AJR26029.1	TZ53_02470	TZ53_22075	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
AJR22802.1	AJR26350.1	TZ53_02470	TZ53_11930	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.600
AJR22802.1	flhA	TZ53_02470	TZ53_02540	Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.	Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.	0.977
AJR24131.1	AJR22547.1	TZ53_10720	TZ53_00840	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
AJR24131.1	AJR24699.1	TZ53_10720	TZ53_14155	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
AJR24131.1	AJR24730.1	TZ53_10720	TZ53_14335	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
AJR24131.1	AJR24768.1	TZ53_10720	TZ53_14585	RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498