STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR24777.1Photosystem reaction center subunit H; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)    
Predicted Functional Partners:
AJR26056.1
Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.695
AJR23550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.695
AJR24778.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
AJR22827.1
Flagellar P-ring protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.493
AJR26057.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.486
AJR24776.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
AJR23408.1
Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
AJR25985.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.410
AJR24441.1
Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.408
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.