AJR24924.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR24924.1

Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)

Predicted Functional Partners:

AJR24925.1

0.984

AJR23927.1

0.982

AJR24926.1

0.973

AJR23017.1

0.970

AJR24931.1

0.955

AJR24929.1

0.949

AJR25075.1

0.949

AJR24930.1

0.948

AJR24932.1

0.948

AJR24928.1

0.947

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23017.1	AJR23927.1	TZ53_03760	TZ53_09525	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
AJR23017.1	AJR24924.1	TZ53_03760	TZ53_15540	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
AJR23017.1	AJR24925.1	TZ53_03760	TZ53_15545	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AJR23017.1	AJR24926.1	TZ53_03760	TZ53_15550	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.656
AJR23017.1	AJR24931.1	TZ53_03760	TZ53_15575	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.457
AJR23017.1	AJR25075.1	TZ53_03760	TZ53_16420	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein tyrosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AJR23927.1	AJR23017.1	TZ53_09525	TZ53_03760	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
AJR23927.1	AJR24924.1	TZ53_09525	TZ53_15540	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
AJR23927.1	AJR24925.1	TZ53_09525	TZ53_15545	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
AJR23927.1	AJR24926.1	TZ53_09525	TZ53_15550	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.666
AJR23927.1	AJR24928.1	TZ53_09525	TZ53_15560	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
AJR23927.1	AJR24931.1	TZ53_09525	TZ53_15575	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.435
AJR23927.1	AJR24932.1	TZ53_09525	TZ53_15580	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transmembrane protein EpsH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448
AJR23927.1	AJR25075.1	TZ53_09525	TZ53_16420	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Protein tyrosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
AJR24924.1	AJR23017.1	TZ53_15540	TZ53_03760	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
AJR24924.1	AJR23927.1	TZ53_15540	TZ53_09525	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
AJR24924.1	AJR24925.1	TZ53_15540	TZ53_15545	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
AJR24924.1	AJR24926.1	TZ53_15540	TZ53_15550	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AJR24924.1	AJR24928.1	TZ53_15540	TZ53_15560	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AJR24924.1	AJR24929.1	TZ53_15540	TZ53_15565	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949