AJR24935.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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[Homology]

Score

AJR24935.1

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)

Predicted Functional Partners:

AJR24934.1

0.833

AJR24929.1

0.708

AJR24937.1

0.689

AJR24699.1

0.647

AJR24936.1

0.604

AJR24938.1

0.599

AJR24439.1

0.573

AJR24926.1

0.561

AJR25573.1

0.533

AJR24925.1

0.528

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR24439.1	AJR24699.1	TZ53_12590	TZ53_14155	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AJR24439.1	AJR24929.1	TZ53_12590	TZ53_15565	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
AJR24439.1	AJR24935.1	TZ53_12590	TZ53_15595	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AJR24439.1	AJR25573.1	TZ53_12590	TZ53_19375	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cadherin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.841
AJR24699.1	AJR24439.1	TZ53_14155	TZ53_12590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.751
AJR24699.1	AJR24935.1	TZ53_14155	TZ53_15595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
AJR24699.1	AJR25573.1	TZ53_14155	TZ53_19375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cadherin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
AJR24925.1	AJR24926.1	TZ53_15545	TZ53_15550	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR24925.1	AJR24929.1	TZ53_15545	TZ53_15565	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
AJR24925.1	AJR24934.1	TZ53_15545	TZ53_15590	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
AJR24925.1	AJR24935.1	TZ53_15545	TZ53_15595	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
AJR24925.1	AJR24938.1	TZ53_15545	TZ53_15615	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	FkbM family methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AJR24926.1	AJR24925.1	TZ53_15550	TZ53_15545	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR24926.1	AJR24929.1	TZ53_15550	TZ53_15565	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AJR24926.1	AJR24934.1	TZ53_15550	TZ53_15590	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AJR24926.1	AJR24935.1	TZ53_15550	TZ53_15595	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
AJR24929.1	AJR24439.1	TZ53_15565	TZ53_12590	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.512
AJR24929.1	AJR24925.1	TZ53_15565	TZ53_15545	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
AJR24929.1	AJR24926.1	TZ53_15565	TZ53_15550	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AJR24929.1	AJR24934.1	TZ53_15565	TZ53_15590	Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.503