STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AJR26434.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)    
Predicted Functional Partners:
AJR24937.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.781
AJR24938.1
FkbM family methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
AJR24939.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.780
AJR24936.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.690
AJR24934.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.494
AJR24935.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
AJR26182.1
Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MurCDEF family.
     
 0.465
AJR24439.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.430
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.