AJR25039.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AJR25039.1

Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)

Predicted Functional Partners:

AJR26150.1

0.821

AJR23009.1

0.797

AJR25055.1

0.735

AJR23806.1

0.706

AJR26304.1

0.689

AJR23739.1

0.688

AJR24699.1

0.629

AJR24768.1

0.626

AJR23620.1

0.607

AJR22547.1

0.582

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22547.1	AJR23009.1	TZ53_00840	TZ53_03720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR22547.1	AJR23620.1	TZ53_00840	TZ53_07720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR23739.1	TZ53_00840	TZ53_08420	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR22547.1	AJR23806.1	TZ53_00840	TZ53_08805	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR22547.1	AJR24699.1	TZ53_00840	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR24768.1	TZ53_00840	TZ53_14585	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR22547.1	AJR25039.1	TZ53_00840	TZ53_16220	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.582
AJR22547.1	AJR25055.1	TZ53_00840	TZ53_16300	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NagC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR22547.1	AJR26150.1	TZ53_00840	TZ53_03710	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR22547.1	AJR26304.1	TZ53_00840	TZ53_09755	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR23009.1	AJR22547.1	TZ53_03720	TZ53_00840	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
AJR23009.1	AJR23620.1	TZ53_03720	TZ53_07720	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
AJR23009.1	AJR24699.1	TZ53_03720	TZ53_14155	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AJR23009.1	AJR24768.1	TZ53_03720	TZ53_14585	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AJR23009.1	AJR25039.1	TZ53_03720	TZ53_16220	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
AJR23620.1	AJR22547.1	TZ53_07720	TZ53_00840	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR23620.1	AJR23009.1	TZ53_07720	TZ53_03720	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
AJR23620.1	AJR23739.1	TZ53_07720	TZ53_08420	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
AJR23620.1	AJR23806.1	TZ53_07720	TZ53_08805	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
AJR23620.1	AJR24699.1	TZ53_07720	TZ53_14155	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999