Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AJR25082.1Haloacid dehalogenase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (254 aa)    
Predicted Functional Partners:
AJR25080.1
Alpha,alpha-trehalose-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
 
 0.999
AJR23434.1
Trehalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
AJR23437.1
Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
AJR25081.1
Glucoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.942
AJR25853.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.715
AJR24131.1
RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
    0.714
AJR26229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
AJR24466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
AJR26452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
AJR26550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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