AJR25103.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

AJR25103.1

Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)

Predicted Functional Partners:

AJR25105.1

0.893

AJR25104.1

0.835

AJR25313.1

0.715

AJR25102.1

0.712

AJR23719.1

0.681

AJR23710.1

0.649

AJR22532.1

0.648

AJR23997.1

0.629

AJR23177.1

0.576

AJR23101.1

0.568

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22532.1	AJR23997.1	TZ53_00760	TZ53_09990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.682
AJR22532.1	AJR25102.1	TZ53_00760	TZ53_16570	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AJR22532.1	AJR25103.1	TZ53_00760	TZ53_16575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AJR22532.1	AJR25105.1	TZ53_00760	TZ53_16585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein TadD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
AJR23101.1	AJR25103.1	TZ53_04275	TZ53_16575	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
AJR23177.1	AJR25103.1	TZ53_04745	TZ53_16575	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AJR23710.1	AJR25103.1	TZ53_08250	TZ53_16575	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
AJR23719.1	AJR25103.1	TZ53_08300	TZ53_16575	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
AJR23997.1	AJR22532.1	TZ53_09990	TZ53_00760	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.682
AJR23997.1	AJR25103.1	TZ53_09990	TZ53_16575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AJR23997.1	AJR25105.1	TZ53_09990	TZ53_16585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein TadD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25102.1	AJR22532.1	TZ53_16570	TZ53_00760	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
AJR25102.1	AJR25103.1	TZ53_16570	TZ53_16575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
AJR25102.1	AJR25104.1	TZ53_16570	TZ53_16580	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.686
AJR25102.1	AJR25105.1	TZ53_16570	TZ53_16585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein TadD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
AJR25103.1	AJR22532.1	TZ53_16575	TZ53_00760	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
AJR25103.1	AJR23101.1	TZ53_16575	TZ53_04275	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
AJR25103.1	AJR23177.1	TZ53_16575	TZ53_04745	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.576
AJR25103.1	AJR23710.1	TZ53_16575	TZ53_08250	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.649
AJR25103.1	AJR23719.1	TZ53_16575	TZ53_08300	Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.	0.681