AJR25179.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR25179.1

Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)

Predicted Functional Partners:

AJR23742.1

0.783

AJR23743.1

0.709

AJR23741.1

0.650

AJR23753.1

0.624

AJR23749.1

0.622

AJR23752.1

0.616

AJR25180.1

0.564

AJR25178.1

0.504

AJR25176.1

0.498

AJR25177.1

0.498

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23741.1	AJR23742.1	TZ53_08430	TZ53_08435	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR23741.1	AJR23743.1	TZ53_08430	TZ53_08440	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AJR23741.1	AJR23749.1	TZ53_08430	TZ53_08470	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
AJR23741.1	AJR23752.1	TZ53_08430	TZ53_08485	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR23741.1	AJR23753.1	TZ53_08430	TZ53_08490	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR23741.1	AJR25179.1	TZ53_08430	TZ53_17030	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
AJR23742.1	AJR23741.1	TZ53_08435	TZ53_08430	Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
AJR23742.1	AJR23743.1	TZ53_08435	TZ53_08440	Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AJR23742.1	AJR23749.1	TZ53_08435	TZ53_08470	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
AJR23742.1	AJR23752.1	TZ53_08435	TZ53_08485	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
AJR23742.1	AJR23753.1	TZ53_08435	TZ53_08490	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.813
AJR23742.1	AJR25179.1	TZ53_08435	TZ53_17030	Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
AJR23743.1	AJR23741.1	TZ53_08440	TZ53_08430	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AJR23743.1	AJR23742.1	TZ53_08440	TZ53_08435	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
AJR23743.1	AJR23752.1	TZ53_08440	TZ53_08485	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AJR23743.1	AJR23753.1	TZ53_08440	TZ53_08490	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
AJR23743.1	AJR25179.1	TZ53_08440	TZ53_17030	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
AJR23749.1	AJR23741.1	TZ53_08470	TZ53_08430	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
AJR23749.1	AJR23742.1	TZ53_08470	TZ53_08435	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
AJR23749.1	AJR23752.1	TZ53_08470	TZ53_08485	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563