AJR25264.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

AJR25264.1

Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)

Predicted Functional Partners:

AJR25267.1

0.957

AJR25266.1

0.816

AJR25268.1

0.813

AJR26479.1

0.812

AJR25256.1

0.790

AJR26211.1

0.785

AJR25259.1

0.785

AJR23356.1

0.782

AJR25261.1

0.782

AJR25265.1

0.773

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23356.1	AJR25256.1	TZ53_05975	TZ53_17520	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
AJR23356.1	AJR25259.1	TZ53_05975	TZ53_17535	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
AJR23356.1	AJR25264.1	TZ53_05975	TZ53_17575	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR23356.1	AJR25267.1	TZ53_05975	TZ53_17590	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
AJR23356.1	AJR26211.1	TZ53_05975	TZ53_05990	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877
AJR23356.1	AJR26479.1	TZ53_05975	TZ53_17560	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
AJR25256.1	AJR23356.1	TZ53_17520	TZ53_05975	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
AJR25256.1	AJR25259.1	TZ53_17520	TZ53_17535	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
AJR25256.1	AJR25261.1	TZ53_17520	TZ53_17550	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
AJR25256.1	AJR25264.1	TZ53_17520	TZ53_17575	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
AJR25256.1	AJR25267.1	TZ53_17520	TZ53_17590	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
AJR25256.1	AJR26211.1	TZ53_17520	TZ53_05990	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
AJR25256.1	AJR26479.1	TZ53_17520	TZ53_17560	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
AJR25259.1	AJR23356.1	TZ53_17535	TZ53_05975	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
AJR25259.1	AJR25256.1	TZ53_17535	TZ53_17520	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.759
AJR25259.1	AJR25261.1	TZ53_17535	TZ53_17550	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
AJR25259.1	AJR25264.1	TZ53_17535	TZ53_17575	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
AJR25259.1	AJR25267.1	TZ53_17535	TZ53_17590	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25259.1	AJR26479.1	TZ53_17535	TZ53_17560	Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
AJR25261.1	AJR25256.1	TZ53_17550	TZ53_17520	Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829