AJR25427.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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gene co-occurrence

gene fusions

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[Homology]

Score

AJR25427.1

(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)

Predicted Functional Partners:

AJR25426.1

0.865

AJR25384.1

0.832

AJR26492.1

0.787

AJR26489.1

0.577

AJR25385.1

0.559

AJR25428.1

0.556

AJR23298.1

0.449

AJR23665.1

0.415

AJR23994.1

0.410

AJR25365.1

0.405

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23298.1	AJR25384.1	TZ53_05535	TZ53_18275	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AJR23298.1	AJR25427.1	TZ53_05535	TZ53_18500	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
AJR23298.1	AJR26492.1	TZ53_05535	TZ53_18550	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bile-acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.862
AJR23665.1	AJR25384.1	TZ53_08010	TZ53_18275	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AJR23665.1	AJR25385.1	TZ53_08010	TZ53_18280	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
AJR23665.1	AJR25427.1	TZ53_08010	TZ53_18500	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
AJR23665.1	AJR26492.1	TZ53_08010	TZ53_18550	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bile-acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AJR23994.1	AJR25427.1	TZ53_09975	TZ53_18500	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
AJR25365.1	AJR25384.1	TZ53_18175	TZ53_18275	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
AJR25365.1	AJR25427.1	TZ53_18175	TZ53_18500	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
AJR25365.1	AJR26492.1	TZ53_18175	TZ53_18550	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bile-acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
AJR25384.1	AJR23298.1	TZ53_18275	TZ53_05535	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.869
AJR25384.1	AJR23665.1	TZ53_18275	TZ53_08010	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
AJR25384.1	AJR25365.1	TZ53_18275	TZ53_18175	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.859
AJR25384.1	AJR25385.1	TZ53_18275	TZ53_18280	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJR25384.1	AJR25426.1	TZ53_18275	TZ53_18495	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
AJR25384.1	AJR25427.1	TZ53_18275	TZ53_18500	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
AJR25385.1	AJR23665.1	TZ53_18280	TZ53_08010	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
AJR25385.1	AJR25384.1	TZ53_18280	TZ53_18275	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AJR25385.1	AJR25426.1	TZ53_18280	TZ53_18495	(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.543