AJR25529.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR25529.1

Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)

Predicted Functional Partners:

AJR26505.1

0.996

AJR25530.1

0.592

AJR25531.1

0.531

bioB

0.510

AJR26451.1

0.450

bioD

0.431

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR25529.1	AJR25530.1	TZ53_19110	TZ53_19120	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
AJR25529.1	AJR25531.1	TZ53_19110	TZ53_19125	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AJR25529.1	AJR26451.1	TZ53_19110	TZ53_16125	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
AJR25529.1	AJR26505.1	TZ53_19110	TZ53_19115	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJR25529.1	bioB	TZ53_19110	TZ53_19015	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	0.510
AJR25529.1	bioD	TZ53_19110	TZ53_10460	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.	0.431
AJR25530.1	AJR25529.1	TZ53_19120	TZ53_19110	Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.592
AJR25530.1	AJR25531.1	TZ53_19120	TZ53_19125	Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJR25530.1	AJR26505.1	TZ53_19120	TZ53_19115	Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AJR25531.1	AJR25529.1	TZ53_19125	TZ53_19110	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AJR25531.1	AJR25530.1	TZ53_19125	TZ53_19120	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AJR25531.1	AJR26505.1	TZ53_19125	TZ53_19115	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AJR26451.1	AJR25529.1	TZ53_16125	TZ53_19110	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.450
AJR26505.1	AJR25529.1	TZ53_19115	TZ53_19110	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AJR26505.1	AJR25530.1	TZ53_19115	TZ53_19120	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
AJR26505.1	AJR25531.1	TZ53_19115	TZ53_19125	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
bioB	AJR25529.1	TZ53_19015	TZ53_19110	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
bioB	bioD	TZ53_19015	TZ53_10460	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.	0.996
bioD	AJR25529.1	TZ53_10460	TZ53_19110	Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.	Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
bioD	bioB	TZ53_10460	TZ53_19015	Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.	Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.	0.996