STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJR25532.1Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)    
Predicted Functional Partners:
AJR24243.1
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
AJR25531.1
ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.526
AJR26419.1
Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
AJR25530.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.523
AJR24134.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.503
AJR26506.1
Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
AJR24473.1
Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
AJR24036.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.413
AJR23032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.412
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.