AJR25565.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

AJR25565.1

Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)

Predicted Functional Partners:

AJR25564.1

0.957

AJR23002.1

0.818

AJR25062.1

0.787

AJR25063.1

0.777

AJR23000.1

0.705

AJR26449.1

0.690

AJR24761.1

0.585

AJR22621.1

0.548

AJR26145.1

0.548

AJR23209.1

0.548

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22621.1	AJR25565.1	TZ53_01285	TZ53_19335	Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
AJR23000.1	AJR23002.1	TZ53_03665	TZ53_03675	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AJR23000.1	AJR24761.1	TZ53_03665	TZ53_14545	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
AJR23000.1	AJR25564.1	TZ53_03665	TZ53_19330	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
AJR23000.1	AJR25565.1	TZ53_03665	TZ53_19335	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
AJR23002.1	AJR23000.1	TZ53_03675	TZ53_03665	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.835
AJR23002.1	AJR25062.1	TZ53_03675	TZ53_16350	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.409
AJR23002.1	AJR25565.1	TZ53_03675	TZ53_19335	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AJR23209.1	AJR25565.1	TZ53_04950	TZ53_19335	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.548
AJR24761.1	AJR23000.1	TZ53_14545	TZ53_03665	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
AJR24761.1	AJR25565.1	TZ53_14545	TZ53_19335	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.585
AJR25062.1	AJR23002.1	TZ53_16350	TZ53_03675	Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.409
AJR25062.1	AJR25063.1	TZ53_16350	TZ53_16355	Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJR25062.1	AJR25565.1	TZ53_16350	TZ53_19335	Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
AJR25062.1	AJR26449.1	TZ53_16350	TZ53_16105	Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.538
AJR25063.1	AJR25062.1	TZ53_16355	TZ53_16350	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJR25063.1	AJR25565.1	TZ53_16355	TZ53_19335	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
AJR25063.1	AJR26449.1	TZ53_16355	TZ53_16105	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.676
AJR25564.1	AJR23000.1	TZ53_19330	TZ53_03665	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
AJR25564.1	AJR25565.1	TZ53_19330	TZ53_19335	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.957