AJR25601.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

AJR25601.1

Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)

Predicted Functional Partners:

AJR25599.1

0.980

AJR25602.1

0.930

AJR23927.1

0.918

AJR25074.1

0.906

AJR26515.1

0.891

AJR25607.1

0.889

AJR25606.1

0.883

AJR24924.1

0.881

AJR23017.1

0.876

AJR25603.1

0.869

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23017.1	AJR23927.1	TZ53_03760	TZ53_09525	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
AJR23017.1	AJR24924.1	TZ53_03760	TZ53_15540	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
AJR23017.1	AJR25074.1	TZ53_03760	TZ53_16415	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
AJR23017.1	AJR25599.1	TZ53_03760	TZ53_19530	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
AJR23017.1	AJR25601.1	TZ53_03760	TZ53_19540	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AJR23017.1	AJR25607.1	TZ53_03760	TZ53_19575	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.409
AJR23017.1	AJR26515.1	TZ53_03760	TZ53_19560	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
AJR23927.1	AJR23017.1	TZ53_09525	TZ53_03760	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
AJR23927.1	AJR24924.1	TZ53_09525	TZ53_15540	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
AJR23927.1	AJR25074.1	TZ53_09525	TZ53_16415	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AJR23927.1	AJR25599.1	TZ53_09525	TZ53_19530	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AJR23927.1	AJR25601.1	TZ53_09525	TZ53_19540	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
AJR23927.1	AJR25602.1	TZ53_09525	TZ53_19545	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.609
AJR23927.1	AJR25603.1	TZ53_09525	TZ53_19550	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	0.457
AJR23927.1	AJR25606.1	TZ53_09525	TZ53_19570	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.475
AJR23927.1	AJR25607.1	TZ53_09525	TZ53_19575	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
AJR23927.1	AJR26515.1	TZ53_09525	TZ53_19560	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
AJR24924.1	AJR23017.1	TZ53_15540	TZ53_03760	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
AJR24924.1	AJR23927.1	TZ53_15540	TZ53_09525	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
AJR24924.1	AJR25074.1	TZ53_15540	TZ53_16415	Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide export outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.929