AJR25608.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

AJR25608.1

1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)

Predicted Functional Partners:

AJR26515.1

0.858

AJR25603.1

0.849

AJR25605.1

0.836

AJR25610.1

0.829

AJR25600.1

0.818

AJR23521.1

0.796

AJR25604.1

0.786

AJR25599.1

0.782

AJR25601.1

0.782

AJR25602.1

0.782

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23521.1	AJR25608.1	TZ53_07050	TZ53_19580	Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
AJR25599.1	AJR25600.1	TZ53_19530	TZ53_19535	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AJR25599.1	AJR25601.1	TZ53_19530	TZ53_19540	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AJR25599.1	AJR25602.1	TZ53_19530	TZ53_19545	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
AJR25599.1	AJR25603.1	TZ53_19530	TZ53_19550	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	0.868
AJR25599.1	AJR25604.1	TZ53_19530	TZ53_19555	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25599.1	AJR25605.1	TZ53_19530	TZ53_19565	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AJR25599.1	AJR25608.1	TZ53_19530	TZ53_19580	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25599.1	AJR25610.1	TZ53_19530	TZ53_19590	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
AJR25599.1	AJR26515.1	TZ53_19530	TZ53_19560	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
AJR25600.1	AJR25599.1	TZ53_19535	TZ53_19530	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AJR25600.1	AJR25601.1	TZ53_19535	TZ53_19540	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
AJR25600.1	AJR25602.1	TZ53_19535	TZ53_19545	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AJR25600.1	AJR25603.1	TZ53_19535	TZ53_19550	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	0.810
AJR25600.1	AJR25604.1	TZ53_19535	TZ53_19555	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25600.1	AJR25605.1	TZ53_19535	TZ53_19565	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
AJR25600.1	AJR25608.1	TZ53_19535	TZ53_19580	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
AJR25600.1	AJR25610.1	TZ53_19535	TZ53_19590	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.840
AJR25600.1	AJR26515.1	TZ53_19535	TZ53_19560	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
AJR25601.1	AJR25599.1	TZ53_19540	TZ53_19530	Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980