AJR25732.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

AJR25732.1

ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)

Predicted Functional Partners:

AJR25731.1

0.783

AJR25730.1

0.534

AJR25733.1

0.513

AJR25734.1

0.513

mltG

0.448

AJR24109.1

0.418

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR24109.1	AJR25732.1	TZ53_10595	TZ53_20280	Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJR25730.1	AJR25731.1	TZ53_20270	TZ53_20275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
AJR25730.1	AJR25732.1	TZ53_20270	TZ53_20280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
AJR25731.1	AJR25730.1	TZ53_20275	TZ53_20270	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.535
AJR25731.1	AJR25732.1	TZ53_20275	TZ53_20280	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
AJR25731.1	AJR25733.1	TZ53_20275	TZ53_20285	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25731.1	AJR25734.1	TZ53_20275	TZ53_20290	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25732.1	AJR24109.1	TZ53_20280	TZ53_10595	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJR25732.1	AJR25730.1	TZ53_20280	TZ53_20270	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.534
AJR25732.1	AJR25731.1	TZ53_20280	TZ53_20275	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
AJR25732.1	AJR25733.1	TZ53_20280	TZ53_20285	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25732.1	AJR25734.1	TZ53_20280	TZ53_20290	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25732.1	mltG	TZ53_20280	TZ53_15880	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.	0.448
AJR25733.1	AJR25731.1	TZ53_20285	TZ53_20275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25733.1	AJR25732.1	TZ53_20285	TZ53_20280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25733.1	AJR25734.1	TZ53_20285	TZ53_20290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25734.1	AJR25731.1	TZ53_20290	TZ53_20275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25734.1	AJR25732.1	TZ53_20290	TZ53_20280	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25734.1	AJR25733.1	TZ53_20290	TZ53_20285	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
mltG	AJR25732.1	TZ53_15880	TZ53_20280	Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.448