AJR25735.1 protein (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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[Homology]

Score

AJR25735.1

Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)

Predicted Functional Partners:

AJR22744.1

0.727

AJR23109.1

0.727

AJR23380.1

0.576

AJR23525.1

0.576

AJR23528.1

0.576

AJR25733.1

0.540

AJR25734.1

0.540

AJR25892.1

0.525

AJR25731.1

0.465

AJR26561.1

0.404

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22744.1	AJR23109.1	TZ53_02075	TZ53_04330	CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
AJR22744.1	AJR25735.1	TZ53_02075	TZ53_20295	CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
AJR23109.1	AJR22744.1	TZ53_04330	TZ53_02075	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.771
AJR23109.1	AJR25735.1	TZ53_04330	TZ53_20295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
AJR23380.1	AJR23525.1	TZ53_06135	TZ53_07100	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
AJR23380.1	AJR25735.1	TZ53_06135	TZ53_20295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AJR23525.1	AJR23380.1	TZ53_07100	TZ53_06135	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
AJR23525.1	AJR25735.1	TZ53_07100	TZ53_20295	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AJR23528.1	AJR25735.1	TZ53_07115	TZ53_20295	Addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.576
AJR25731.1	AJR25733.1	TZ53_20275	TZ53_20285	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25731.1	AJR25734.1	TZ53_20275	TZ53_20290	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25731.1	AJR25735.1	TZ53_20275	TZ53_20295	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.465
AJR25733.1	AJR25731.1	TZ53_20285	TZ53_20275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25733.1	AJR25734.1	TZ53_20285	TZ53_20290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25733.1	AJR25735.1	TZ53_20285	TZ53_20295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AJR25734.1	AJR25731.1	TZ53_20290	TZ53_20275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug transporter MatE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
AJR25734.1	AJR25733.1	TZ53_20290	TZ53_20285	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AJR25734.1	AJR25735.1	TZ53_20290	TZ53_20295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
AJR25735.1	AJR22744.1	TZ53_20295	TZ53_02075	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
AJR25735.1	AJR23109.1	TZ53_20295	TZ53_04330	Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727